【問題】star: ultrafast universal rna-seq aligner ?推薦回答
關於「star: ultrafast universal rna-seq aligner」標籤,搜尋引擎有相關的訊息討論:
STAR: ultrafast universal RNA-seq aligner - NCBI。
Results: To align our large (>80 billon reads) ENCODE Transcriptome RNA-seq dataset, we developed the Spliced Transcripts Alignment to a Reference (STAR) ...: 。
STAR: ultrafast universal RNA-seq aligner - PubMed。
STAR: ultrafast universal RNA-seq aligner. Bioinformatics. 2013 Jan 1;29(1):15-21. doi: 10.1093/bioinformatics/bts635. Epub 2012 Oct 25.: 。
alexdobin/STAR: RNA-seq aligner - GitHub。
RNA-seq aligner. Contribute to alexdobin/STAR development by creating an account on GitHub.: 。
accurate and repeat tolerant realignment of RNA-seq reads。
Critically, RNA-seq aligners must be able to identify exonic alignments in regions that can be interspersed ... STAR: ultrafast universal RNA-seq aligner.。
HSRA: Hadoop-based spliced read aligner for RNA sequencing data。
2018年7月31日 · In RNA-seq experiments, the mapping of short reads to a reference genome or transcriptome is ... STAR: ultrafast universal RNA-seq aligner.。
TopHat2: accurate alignment of transcriptomes - Genome Biology。
2013年4月25日 · TopHat is a popular spliced aligner for RNA-sequence (RNA-seq) experiments. ... Gingeras TR: STAR: ultrafast universal RNA-seq aligner.。
A survey of best practices for RNA-seq data analysis | Genome Biology。
2016年1月26日 · Dobin A, Davis CA, Schlesinger F, Drenkow J, Zaleski C, Jha S, et al. STAR: ultrafast universal RNA-seq aligner. Bioinformatics.。
[PDF] Web-based bioinformatics workflows for end-to-end RNA-seq data ...。
The third combines STAR, RSEM, and EdgeR ... are RNA-seq specific aligners, which are capable of identi- ... STAR: ultrafast universal RNA-seq aligner.。
A high-efficiency preprocessing tool for single-cell sequencing data ...。
2021年8月14日 · Recently, Rosenberg et al. developed a single-cell RNA-seq method, split-pool ligation-based ... STAR: ultrafast universal RNA-seq aligner.。
Analysis of Whole Transcriptome Sequencing Data: Workflow and ...。
2015年12月31日 · Dobin A, Davis CA, Schlesinger F, Drenkow J, Zaleski C, Jha S, et al. STAR: ultrafast universal RNA-seq aligner. Bioinformatics 2013;29:15-21.
常見star: ultrafast universal rna-seq aligner問答
延伸文章資訊As far as I know, STAR doesn't run under Windows 10. Would you consider another aligner? Rsubread...
STAR aligner. Spliced Transcripts Alignment to a Reference is a fast RNA-seq read mapper, with su...
STAR will output a non-chimeric alignment into Aligned.out.sam with soft-clipping a portion of th...
Spliced Transcripts Alignment to a Reference (STAR) is a fast RNA-seq read mapper, with support f...
STAR outperforms other aligners by a factor of >50 in mapping speed, aligning to the human genome...
As far as I know, STAR doesn't run under Windows 10. Would you consider another aligner? Rsubread...
STAR aligner. Spliced Transcripts Alignment to a Reference is a fast RNA-seq read mapper, with su...
STAR will output a non-chimeric alignment into Aligned.out.sam with soft-clipping a portion of th...
Spliced Transcripts Alignment to a Reference (STAR) is a fast RNA-seq read mapper, with support f...
STAR outperforms other aligners by a factor of >50 in mapping speed, aligning to the human genome...