【問題】stringtie enables improved reconstruction of a transcriptome from rna-seq reads ?推薦回答

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有關 stringtie enables improved reconstruction of a transcriptome from rna-seq reads?tw 的學術文章scholar.google.com › citations。

StringTie enables improved reconstruction of a ... - PubMed。

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads. Nat Biotechnol. 2015 Mar;33(3):290-5. doi: 10.1038/nbt.3122.: 。

StringTie enables improved reconstruction of a transcriptome ... - NCBI。

2015年2月18日 · An RNA-seq run can produce more than 200 million short reads, each of which is 100–150 base pairs (bp). Assembling these short reads into full ...: 。

StringTie enables improved reconstruction of a transcriptome from ...。

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads. Mihaela Pertea, Geo M. Pertea, Corina M. Antonescu, Tsung Cheng Chang, ...: 。

StringTie enables improved reconstruction of a ... - Semantic Scholar。

Methods used to sequence the transcriptome often produce more than 200 million short sequences. We introduce StringTie, a computational method that applies ...: 。

DTA-SiST: de novo transcriptome assembly by using simplified suffix ...。

2019年12月24日 · However, the massive size of short reads makes de novo ... Stringtie enables improved reconstruction of a transcriptome from rna-seq reads.。

TransComb: genome-guided transcriptome assembly via combing ...。

2016年10月19日 · Pertea M, Pertea GM, Antonescu CM, Chang TC, Mendell JT, et al. StringTie enables improved reconstruction of a transcriptome from RNA-seq reads.。

Strawberry: fast and accurate genome-guided transcript ... - bioRxiv。

2016年3月16日 · In a nutshell, Strawberry accepts aligned RNA-seq data to construct ... StringTie enables improved reconstruction of a transcriptome from ...。

AIDE: annotation-assisted isoform discovery with high precision。

2019年11月1日 · Gene-level isoform discovery and abundance estimation results of AIDE, Cufflinks, StringTie, and SLIDE on simulated RNA-seq data with 10× ...。

Analysis of Whole Transcriptome Sequencing Data: Workflow and ...。

2015年12月31日 · Typical workflow for RNA sequencing (RNA-seq) data analysis. ... StringTie enables improved reconstruction of a transcriptome from RNA-seq ...。

TransBorrow: genome-guided transcriptome assembly by borrowing ...。

2020年8月17日 · 2013) usually first map all RNA-seq reads to the genome using mapping ... for reconstructing a consensus transcriptome from multiple RNA-seq ...


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