前往 Mapping with HISAT2 - Bioinformatics Team - UT Austin Wikis
常見HISAT2問答
HISAT2 dtaHISAT2 githubHISAT2 manualHISAT2 citationhisat2分析hisat2-buildHISAT2hisat2使用BWA MEM tutorialBowtie alignmentBowtie2BWAfeaturecounts: an efficient general purpose program for assigning sequence reads to genomic featuresstringtie enables improved reconstruction of a transcriptome from rna-seq readsSTAR alignerHISAT2 vs STAR
延伸文章資訊You should build the index with something like: hisat2-build genome.fa index_name. Where genome.f...
HISAT2 is the fastest spliced mapper currently available. It is part of the new tuxedo suite of t...
HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (bo...
HISAT2 is a successor to both HISAT and TopHat2. We recommend that the HISAT and TopHat2 users sw...
HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (wh...
可以發現TopHat 和STAR 雖然在數量上高於HISAT2，但HISAT2 在自己獨有的junctions 是最少的，且HISAT2 的驗證率皆有80% 以上(STAR 在42%~54%)。...
HISAT2 implements a graph-based data structure and an alignment algorithm to enable fast and sens...
You should build the index with something like: hisat2-build genome.fa index_name. Where genome.f...
HISAT2 is the fastest spliced mapper currently available. It is part of the new tuxedo suite of t...
HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (bo...
HISAT2 is a successor to both HISAT and TopHat2. We recommend that the HISAT and TopHat2 users sw...
HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (wh...
可以發現TopHat 和STAR 雖然在數量上高於HISAT2，但HISAT2 在自己獨有的junctions 是最少的，且HISAT2 的驗證率皆有80% 以上(STAR 在42%~54%)。...
HISAT2 implements a graph-based data structure and an alignment algorithm to enable fast and sens...